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data preprocessing assistant for resting-state fmri (dparsf) software  (MathWorks Inc)


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    MathWorks Inc data preprocessing assistant for resting-state fmri (dparsf) software
    Data Preprocessing Assistant For Resting State Fmri (Dparsf) Software, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/data+preprocessing+software/pmc11978534-132-22-27
    Average 90 stars, based on 1 article reviews
    data preprocessing assistant for resting-state fmri (dparsf) software - by Bioz Stars, 2026-10
    90/100 stars

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    Article Title: Reduced local functional connectivity correlates with atypical performances in children with autism spectrum disorder
    Article Snippet: The rs-fMRI data of the 28 ASD subjects and the 23 control images were separately processed using the Data Preprocessing Assistant for Resting-State fMRI (DPARSF) software in Matlab 2017b (David & Skilbeck, ).

    Article Title: The human reward system encodes the subjective value of ideas during creative thinking
    Article Snippet: In this preprocessing analysis, we used the Matlab PhysIO Toolbox (version 5.1.2, open-source code available as part of the TAPAS software collection: https://www.translationalneuromodeling.org/tapas ) to generate nuisance regressors for the GLM.

    Article Title: The Application of Near-Infrared Spectroscopy Combined with Chemometrics in the Determination of the Nutrient Composition in Chinese Cyperus esculentus L.
    Article Snippet: Data preprocessing, data modeling, and model plotting were all conducted using MATLAB software (Version R2024b, MathWorks, United States).

    Article Title: Surface-enhanced Raman spectroscopy for the characterization of filtrate portions of hepatitis B blood serum samples using 100 kDa ultra filtration devices.
    Article Snippet: • SERS is used to characterize blood serum filtrates from HBV-infected patients and healthy individuals.. • Silver nanoparticles are utilized as SERS substrate.. • SERS spectral features of HBV patients’ serum filtrate differ from healthy volunteers, useful for diagnostic purposes.

    Software:

    Article Title: Predicting Treatment Response of rTMS in Major Depressive Disorder Using a Explainable Machine Learning Model Based on EEG and Clinical Features.
    Article Snippet: Objective: Major Depressive Disorder (MDD) is highly heterogeneous in response to rTMS, and identifying predictive biomarkers is essential for personalized treatment.. However, current researches either only uses EEG or clinical features, lacks interpretability, or have small sample sizes.. Method: This study included 74 MDD patients who responded (Responder) and 43 MDD who did not respond (NonResponder) to rTMS.

    Article Title: Unveiling brain response mechanisms of citrus flavor perception: An EEG-based study on sensory and cognitive responses.
    Article Snippet: Citrus flavors are globally popular in food industry, yet research on the perceptual preferences of various citrus flavors is limited.. Based on the subjective sensory evaluation, this study introduces a novel sensory analysis approach, using electroencephalography (EEG), to objectively measure the sensory and cognitive responses to nine citrus flavors, including D-limonene, concentrated (H-) and original essential oils of sweet orange (SEO), bergamot EO (BEO), lemon EO (LEO), and grapefruit EO (GEO).. Results revealed that δ (0.5–4 Hz) and α (8–13 Hz) waves activity predominated in brain responses to citrus flavor, with greater activity observed in frontal and central regions compared to other areas.

    Article Title: Combustion reactivity of hydrothermally derived biochar from sugarcane green harvesting residues (GHR): An evaluation as a solid fuel.
    Article Snippet: • Novel macro-scale TGA enabled combustion reactivity analysis of

    Article Title: Functional connectivity changes in the prefrontal-thalamic-cerebellar circuit in adolescents with first-episode Schizophrenia.
    Article Snippet: 1 Department of Psychiatry, Henan Mental Hospital, The Second Affiliated Hospital of Xinxiang Medical University, Xinxiang 453002, China 2 Henan Key Lab of Biological Psychiatry, Xinxiang Medical University, Xinxiang 453002, China 3 International Joint Research Laboratory for Psychiatry and Neuroscience of Henan of Xinxiang Medical University, Xinxiang 453002, China 4 Henan Collaborative Innovation Center of Prevention and treatment of mental disorder, Xinxiang 453002, China 5 Xinxiang Key Laboratory of Child and Adolescent Psychiatry, Xinxiang 453002, China 6 Brain Institute, Henan Academy of Innovations in Medical Science, Xinxiang 453002, China 7 The Fifth Affiliated Hospital of Zhengzhou University, Zhengzhou 450052, China Abstract Background The role of functional connectivity (FC) changes in the prefrontal-thalamic-cerebellar circuit in schizophrenia has received widespread attention.. Currently, domestic and international studies on this circuit have focused on adults, while the FC of this circuit in the brains of adolescent patients with schizophrenia (AOS) has been less reported.. Methods We recruited 124 subjects who underwent resting-state functional magnetic resonance imaging scans at baseline, using key brain regions in the prefrontal-thalamic-cerebellar circuit as seed regions, to investigate the FC in AOS versus healthy controls.



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    Image Search Results


    Erotica-induced modulation of NFR, pain, N2 and P2 in studies 2 and 3.

    Journal: Neurobiology of Pain

    Article Title: Cerebral peak alpha frequency: Associations with chronic pain onset and pain modulation

    doi: 10.1016/j.ynpai.2025.100180

    Figure Lengend Snippet: Erotica-induced modulation of NFR, pain, N2 and P2 in studies 2 and 3.

    Article Snippet: For analysis of PEPs during CPM and ECON, EEG data were preprocessed and analyzed in BrainVision Analyzer Software (Version 2.1.2.327).

    Techniques:

    Mutilation-induced modulation of NFR, pain, N2 and P2 in studies 2 & 3.

    Journal: Neurobiology of Pain

    Article Title: Cerebral peak alpha frequency: Associations with chronic pain onset and pain modulation

    doi: 10.1016/j.ynpai.2025.100180

    Figure Lengend Snippet: Mutilation-induced modulation of NFR, pain, N2 and P2 in studies 2 & 3.

    Article Snippet: For analysis of PEPs during CPM and ECON, EEG data were preprocessed and analyzed in BrainVision Analyzer Software (Version 2.1.2.327).

    Techniques:

    Grand average EEG waveforms at Cz for ECON. Time windows used for analysis of N2 (90–140 ms) and P2 (280–350 ms) are shaded.

    Journal: Neurobiology of Pain

    Article Title: Cerebral peak alpha frequency: Associations with chronic pain onset and pain modulation

    doi: 10.1016/j.ynpai.2025.100180

    Figure Lengend Snippet: Grand average EEG waveforms at Cz for ECON. Time windows used for analysis of N2 (90–140 ms) and P2 (280–350 ms) are shaded.

    Article Snippet: For analysis of PEPs during CPM and ECON, EEG data were preprocessed and analyzed in BrainVision Analyzer Software (Version 2.1.2.327).

    Techniques:

    (A) Key parameters involved in each of the three major data processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from Inscopix Data Preprocessing Software (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.

    Journal: bioRxiv

    Article Title: Robust characterization of selectivity of individual neurons to distinct task-relevant behavioral states using calcium imaging

    doi: 10.1101/2024.11.30.626195

    Figure Lengend Snippet: (A) Key parameters involved in each of the three major data processing stages from data collection to assessment of selectivity. (B) Using a single coordinate to characterize the position of the mouse in the maze: head-centroid position versus body-centroid position. (C) Non-binned calcium transients (top) versus 1s-binned calcium transients (bottom). The 1s-binned calcium transients were obtained by averaging values in a moving 1-second window. (D) Illustration of the types of neural data investigated in the current study. Raw Ca traces and Ca events were preprocessed and output directly from Inscopix Data Preprocessing Software (IDPS). Convolved Ca events were obtained by applying a convolution kernel to the Ca events. Ca traces analyzed in the current study referred to the lowpass-subtracted rectified Ca traces, which were obtained by subtracting the low-pass component from the raw Ca traces and rectifying them. (E) Illustration of the number-matched method. The time spent in open arms is shown by gray bars. Yellow bars refer to random subsets of closed-arm bouts. (F) Representations of the procedures of the four shuffling methods, arranged from the lowest degree of randomness to the highest degree of randomness.

    Article Snippet: Raw movie data were preprocessed using the Inscopix Data Preprocessing Software (IDPS).

    Techniques: Software